RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g10860.1 View Network Show in Genome Browser |
| Other Names | Os03g0206400 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 5582039-5582714 Nucleotide Length: 276 |
| Protein-coding | LOC_Os03g10860 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g29740 LOC_Os01g49710 LOC_Os02g53860 LOC_Os01g52010 LOC_Os02g19150 LOC_Os01g51980 LOC_Os01g49720 LOC_Os01g09620 LOC_Os03g05310 |
| Downstream Genes | LOC_Os05g49380 LOC_Os10g38710 LOC_Os10g38580 LOC_Os10g38360 LOC_Os10g38340 LOC_Os09g39560 LOC_Os03g31490 LOC_Os10g38160 LOC_Os08g13320 LOC_Os10g38470 LOC_Os10g38700 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g10860.1 |
| Rice Genome Annotation | LOC_Os03g10860.1 |
| Ricechip | LOC_Os03g10860.1 |
| KEGG | osa:4331997 dosa:Os03t0206400-02 |
| Entrez-Gene | 4331997 |