RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g10940.1 View Network Show in Genome Browser |
| Other Names | Os03g0207300 |
| Description | casein kinase II subunit alpha-2, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 5616047-5620727 Nucleotide Length: 999 |
| Protein-coding | LOC_Os03g10940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08970 LOC_Os02g47150 LOC_Os02g04160 LOC_Os02g05630 LOC_Os02g15220 LOC_Os02g57590 LOC_Os01g72890 LOC_Os03g02780 LOC_Os02g45940 LOC_Os01g61920 LOC_Os02g15594 More.. |
| Downstream Genes | LOC_Os10g41520 LOC_Os07g31280 LOC_Os05g08970 LOC_Os04g25550 LOC_Os08g06070 LOC_Os06g08480 LOC_Os07g29360 LOC_Os12g38970 LOC_Os07g01880 LOC_Os12g06910 LOC_Os08g31240 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g10940.1 |
| Rice Genome Annotation | LOC_Os03g10940.1 |
| Ricechip | LOC_Os03g10940.1 |
| KEGG | osa:4332003 dosa:Os03t0207300-01 |
| Entrez-Gene | 4332003 |