RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g11140.1 View Network Show in Genome Browser |
| Other Names | Os03g0209800 |
| Description | pleckstrin homology domain-containing protein-related taxo, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 5735001-5746233 Nucleotide Length: 2583 |
| Protein-coding | LOC_Os03g11140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009875 | pollen-pistil interaction | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g20850 LOC_Os02g58730 LOC_Os02g02840 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2105 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g11140.1 |
| Rice Genome Annotation | LOC_Os03g11140.1 |
| Ricechip | LOC_Os03g11140.1 |
| KEGG | osa:4332020 dosa:Os03t0209800-01 |
| Entrez-Gene | 4332020 |