RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g11200.1 View Network Show in Genome Browser |
| Other Names | Os03g0210400 |
| Description | pre-mRNA-processing factor 39, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 5760804-5767440 Nucleotide Length: 2370 |
| Protein-coding | LOC_Os03g11200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g39300 LOC_Os02g37430 LOC_Os02g39890 LOC_Os02g01250 LOC_Os02g04480 LOC_Os01g73604 LOC_Os02g05310 LOC_Os02g01740 LOC_Os02g02290 LOC_Os02g13990 LOC_Os02g58090 More.. |
| Downstream Genes | LOC_Os10g02630 LOC_Os07g33330 LOC_Os10g34380 LOC_Os10g35550 LOC_Os03g22570 LOC_Os05g24970 LOC_Os04g39444 LOC_Os09g02700 LOC_Os03g13760 LOC_Os05g07050 LOC_Os03g62640 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g11200.1 |
| Rice Genome Annotation | LOC_Os03g11200.1 |
| Ricechip | LOC_Os03g11200.1 |
| KEGG | osa:4332022 dosa:Os03t0210400-01 |
| Entrez-Gene | 4332022 |