RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g11520.1 View Network Show in Genome Browser |
| Other Names | Os03g0213900 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 5967188-5973722 Nucleotide Length: 2064 |
| Protein-coding | LOC_Os03g11520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g08284 LOC_Os02g47744 LOC_Os01g62750 |
| Downstream Genes | LOC_Os09g03310 LOC_Os05g26954 LOC_Os11g09864 LOC_Os05g22960 LOC_Os11g41820 LOC_Os11g45590 LOC_Os06g05870 LOC_Os03g62610 LOC_Os08g13630 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g11520.1 |
| Rice Genome Annotation | LOC_Os03g11520.1 |
| Ricechip | LOC_Os03g11520.1 |
| KEGG | osa:4332050 dosa:Os03t0213900-02 |
| Entrez-Gene | 4332050 |