RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g11910.1 View Network Show in Genome Browser |
| Other Names | Os03g0218500 |
| Description | DnaK family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 6243990-6247317 Nucleotide Length: 1737 |
| Protein-coding | LOC_Os03g11910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g43930 LOC_Os02g39870 LOC_Os02g35000 LOC_Os02g03600 LOC_Os02g46640 LOC_Os01g50700 LOC_Os02g54130 LOC_Os01g32870 LOC_Os01g42190 LOC_Os01g74580 LOC_Os02g20394 More.. |
| Downstream Genes | LOC_Os06g02620 LOC_Os08g36140 LOC_Os05g06440 LOC_Os12g07060 LOC_Os03g44620 LOC_Os07g32950 LOC_Os04g35180 LOC_Os12g42440 LOC_Os04g46390 LOC_Os08g25090 LOC_Os03g57340 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5498 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g11910.1 |
| Rice Genome Annotation | LOC_Os03g11910.1 |
| Ricechip | LOC_Os03g11910.1 |
| KEGG | osa:4332080 dosa:Os03t0218500-01 |
| Entrez-Gene | 4332080 |