RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g11980.1 View Network Show in Genome Browser |
| Other Names | Os03g0219400 |
| Description | beta-hexosaminidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 6280174-6282712 Nucleotide Length: 1818 |
| Protein-coding | LOC_Os03g11980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os07g12570 LOC_Os07g12560 LOC_Os07g12550 LOC_Os07g12540 LOC_Os07g38130 LOC_Os04g28260 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00520 rn00531 rn00604 rn00603 rn01100 rn00511 rn00513 |
| Metacyc Pathways | PWY-6573 PWY-6576 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g11980.1 |
| Rice Genome Annotation | LOC_Os03g11980.1 |
| Ricechip | LOC_Os03g11980.1 |
| KEGG | osa:4332084 dosa:Os03t0219400-01 |
| Entrez-Gene | 4332084 |