RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g12030.1 View Network Show in Genome Browser |
| Other Names | Os03g0220100 |
| Description | 3-ketoacyl-CoA synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 6302790-6304928 Nucleotide Length: 1485 |
| Protein-coding | LOC_Os03g12030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g30060 LOC_Os03g04440 LOC_Os01g71280 LOC_Os02g10320 LOC_Os03g05310 LOC_Os03g02640 LOC_Os01g64270 LOC_Os01g53240 LOC_Os01g66010 LOC_Os02g47650 LOC_Os02g42570 More.. |
| Downstream Genes | LOC_Os03g18590 LOC_Os12g02120 LOC_Os11g02180 LOC_Os04g40730 LOC_Os06g09630 LOC_Os07g42420 LOC_Os04g36800 LOC_Os12g13930 LOC_Os04g30760 LOC_Os06g34790 LOC_Os07g47540 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | FASYN-INITIAL-PWY FASYN-ELONG-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g12030.1 |
| Rice Genome Annotation | LOC_Os03g12030.1 |
| Ricechip | LOC_Os03g12030.1 |
| KEGG | osa:4332090 dosa:Os03t0220100-01 |
| Entrez-Gene | 4332090 |