RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g12110.2 View Network Show in Genome Browser |
| Other Names | Os03g0221200 |
| Description | homocysteine S-methyltransferase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 6354859-6357807 Nucleotide Length: 849 |
| Protein-coding | LOC_Os03g12110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g15260 LOC_Os01g22010 LOC_Os01g18860 LOC_Os03g08830 LOC_Os02g17390 LOC_Os02g12890 LOC_Os01g50590 LOC_Os01g62350 LOC_Os01g37910 |
| Downstream Genes | LOC_Os11g26850 LOC_Os05g04510 LOC_Os03g44484 LOC_Os04g42000 LOC_Os03g60090 LOC_Os09g33780 LOC_Os05g38520 LOC_Os10g35470 LOC_Os10g27340 LOC_Os06g01610 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g12110.2 |
| Rice Genome Annotation | LOC_Os03g12110.2 |
| Ricechip | LOC_Os03g12110.2 |
| KEGG | osa:4332095 dosa:Os03t0221200-01 |
| Entrez-Gene | 4332095 |