RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g12140.1 View Network Show in Genome Browser |
| Other Names | Os03g0221500 |
| Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 6369445-6373705 Nucleotide Length: 1515 |
| Protein-coding | LOC_Os03g12140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g47150 LOC_Os01g70560 LOC_Os01g67110 LOC_Os03g02290 LOC_Os01g55040 LOC_Os01g15480 LOC_Os01g47070 LOC_Os01g68930 LOC_Os03g03610 LOC_Os02g35230 |
| Downstream Genes | LOC_Os08g03560 LOC_Os12g41230 LOC_Os08g44420 LOC_Os08g44410 LOC_Os08g40170 LOC_Os11g37100 LOC_Os05g46330 LOC_Os06g08380 LOC_Os07g08330 LOC_Os05g41610 LOC_Os09g36440 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g12140.1 |
| Rice Genome Annotation | LOC_Os03g12140.1 |
| Ricechip | LOC_Os03g12140.1 |
| KEGG | osa:4332097 dosa:Os03t0221500-01 |
| Entrez-Gene | 4332097 |