RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g12236.2 View Network Show in Genome Browser
Other Names	Os03g0222800,Os03g0222700
Description	heat shock protein DnaJ, putative, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 6424393-6426920 Nucleotide Length: 534
Protein-coding	LOC_Os03g12236

Gene Ontology Classification
GO	Name	Type	Code
GO:0009987	cellular process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0019538	protein metabolic process	Biological Process	IEA
GO:0019538	protein metabolic process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0009536	plastid	Cellular Component	IEA
GO:0009536	plastid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g48110 LOC_Os02g02410 LOC_Os01g08560 LOC_Os01g49430 LOC_Os02g53420 LOC_Os03g02260 LOC_Os01g33360 LOC_Os01g62290 LOC_Os02g39870 LOC_Os03g11910 LOC_Os01g48690 More..
Downstream Genes	LOC_Os12g05760 LOC_Os09g31486 LOC_Os05g08840 LOC_Os06g46600 LOC_Os03g50250 LOC_Os03g16880 LOC_Os12g14070 LOC_Os05g51360 LOC_Os05g35400 LOC_Os11g08440 LOC_Os12g38180 More..

miRNA Regulations
miRNAs	osa-miR1442

Database Links
Gramene	LOC_Os03g12236.2
Rice Genome Annotation	LOC_Os03g12236.2
Ricechip	LOC_Os03g12236.2
KEGG	osa:9272246 dosa:Os03t0222800-01 dosa:Os03t0222700-01
Entrez-Gene	9272246