RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g12270.1 View Network Show in Genome Browser |
| Other Names | Os03g0223200 |
| Description | dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 6453082-6455593 Nucleotide Length: 1089 |
| Protein-coding | LOC_Os03g12270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g27300 LOC_Os01g28450 LOC_Os02g32490 LOC_Os01g55820 LOC_Os02g12794 LOC_Os02g12800 LOC_Os02g02700 LOC_Os02g07870 LOC_Os02g57040 LOC_Os02g35630 LOC_Os03g01190 More.. |
| Downstream Genes | LOC_Os04g41960 LOC_Os12g01160 LOC_Os11g01154 LOC_Os07g14070 LOC_Os07g14030 LOC_Os07g03730 LOC_Os06g37440 LOC_Os11g16410 LOC_Os03g30830 LOC_Os07g03710 LOC_Os06g45120 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR3980a-3p osa-miR3980b-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g12270.1 |
| Rice Genome Annotation | LOC_Os03g12270.1 |
| Ricechip | LOC_Os03g12270.1 |
| KEGG | osa:9266669 dosa:Os03t0223200-00 |
| Entrez-Gene | 9266669 |