RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g12300.1 View Network Show in Genome Browser |
| Other Names | Os03g0223700 |
| Description | HEAT repeat family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 6468312-6474770 Nucleotide Length: 2136 |
| Protein-coding | LOC_Os03g12300 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g52250 LOC_Os02g53060 LOC_Os01g32800 LOC_Os02g05330 LOC_Os03g11570 LOC_Os02g05310 LOC_Os01g60440 LOC_Os01g60040 LOC_Os02g06592 LOC_Os02g55340 LOC_Os01g74180 More.. |
| Downstream Genes | LOC_Os08g01750 LOC_Os03g28140 LOC_Os06g04800 LOC_Os08g34950 LOC_Os04g04320 LOC_Os06g48750 LOC_Os06g24840 LOC_Os06g11420 LOC_Os11g04220 LOC_Os09g07510 LOC_Os07g46540 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g12300.1 |
| Rice Genome Annotation | LOC_Os03g12300.1 |
| Ricechip | LOC_Os03g12300.1 |
| KEGG | osa:4332109 dosa:Os03t0223700-01 |
| Entrez-Gene | 4332109 |