RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g12320.1 View Network Show in Genome Browser |
| Other Names | Os03g0223900 |
| Description | UDP-3-O- N-acetylglucosamine deacetylase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 6493908-6498974 Nucleotide Length: 966 |
| Protein-coding | LOC_Os03g12320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g33230 LOC_Os01g11260 LOC_Os01g21820 LOC_Os02g04500 LOC_Os03g05980 |
| Downstream Genes | LOC_Os05g37160 LOC_Os04g56970 LOC_Os03g44420 LOC_Os10g40130 LOC_Os11g08980 LOC_Os07g49110 LOC_Os07g46640 LOC_Os10g41410 LOC_Os03g17120 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1848 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g12320.1 |
| Rice Genome Annotation | LOC_Os03g12320.1 |
| Ricechip | LOC_Os03g12320.1 |
| KEGG | osa:4332110 dosa:Os03t0223900-01 |
| Entrez-Gene | 4332110 |