RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g12350.4 View Network Show in Genome Browser |
| Other Names | Os03g0224200 |
| Description | two-component response regulator, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 6512744-6518792 Nucleotide Length: 2076 |
| Protein-coding | LOC_Os03g12350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g46030 |
| Downstream Genes | LOC_Os08g06110 LOC_Os09g39400 LOC_Os08g44350 LOC_Os06g08450 LOC_Os06g44410 LOC_Os03g49500 LOC_Os06g51260 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2103 |
| Reference | |
|---|---|
| PubMed | 16919402 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g12350.4 |
| Rice Genome Annotation | LOC_Os03g12350.4 |
| Ricechip | LOC_Os03g12350.4 |
| KEGG | osa:4332111 dosa:Os03t0224200-01 |
| Entrez-Gene | 4332111 |