RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g12414.2 View Network Show in Genome Browser |
| Other Names | Os03g0225200 |
| Description | cyclin, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 6556387-6562025 Nucleotide Length: 1410 |
| Protein-coding | LOC_Os03g12414 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g27940 LOC_Os03g10070 LOC_Os02g05040 |
| Downstream Genes | LOC_Os09g29100 LOC_Os12g39830 LOC_Os12g30020 LOC_Os03g52750 LOC_Os10g41430 LOC_Os05g33040 LOC_Os04g53680 LOC_Os04g46660 LOC_Os09g36440 LOC_Os08g42020 LOC_Os03g13480 More.. |
| Reference | |
|---|---|
| PubMed | 19417775 16435118 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g12414.2 |
| Rice Genome Annotation | LOC_Os03g12414.2 |
| Ricechip | LOC_Os03g12414.2 |
| KEGG | osa:4332116 dosa:Os03t0225200-01 |
| Entrez-Gene | 4332116 |