RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g12460.1 View Network Show in Genome Browser |
| Other Names | Os03g0225600 |
| Description | conserved oligomeric complex COG6 family protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 6581187-6587867 Nucleotide Length: 2070 |
| Protein-coding | LOC_Os03g12460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g05730 LOC_Os02g58730 LOC_Os02g12794 LOC_Os02g12800 LOC_Os02g57990 LOC_Os01g67960 LOC_Os03g12300 LOC_Os03g11100 LOC_Os01g74180 LOC_Os02g12740 LOC_Os01g47540 More.. |
| Downstream Genes | LOC_Os08g34970 LOC_Os05g48020 LOC_Os10g30580 LOC_Os06g47320 LOC_Os05g44340 LOC_Os06g37440 LOC_Os09g30418 LOC_Os09g30412 LOC_Os08g39140 LOC_Os05g38630 LOC_Os05g28190 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g12460.1 |
| Rice Genome Annotation | LOC_Os03g12460.1 |
| Ricechip | LOC_Os03g12460.1 |
| KEGG | osa:4332119 dosa:Os03t0225600-01 |
| Entrez-Gene | 4332119 |