RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g12710.1 View Network Show in Genome Browser |
| Other Names | Os03g0228400 |
| Description | clathrin adaptor complex small chain domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 6782682-6785978 Nucleotide Length: 501 |
| Protein-coding | LOC_Os03g12710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g32880 LOC_Os01g74180 LOC_Os02g40000 LOC_Os02g11830 LOC_Os02g03450 LOC_Os03g12460 LOC_Os01g59790 LOC_Os01g55820 LOC_Os01g16030 LOC_Os01g25110 LOC_Os02g55400 More.. |
| Downstream Genes | LOC_Os12g10560 LOC_Os09g36976 LOC_Os03g59660 LOC_Os03g57040 LOC_Os03g46750 LOC_Os03g53230 LOC_Os07g37650 LOC_Os03g60700 LOC_Os03g30460 LOC_Os03g27450 LOC_Os07g10830 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g12710.1 |
| Rice Genome Annotation | LOC_Os03g12710.1 |
| Ricechip | LOC_Os03g12710.1 |
| KEGG | osa:4332139 dosa:Os03t0228400-01 |
| Entrez-Gene | 4332139 |