RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g12730.1 View Network Show in Genome Browser
Other Names	Os03g0228800
Description	receptor protein kinase CLAVATA1 precursor, putative, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 6804510-6808794 Nucleotide Length: 3024
Protein-coding	LOC_Os03g12730

Gene Ontology Classification
GO	Name	Type	Code
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0030154	cell differentiation	Biological Process	IEA
GO:0009908	flower development	Biological Process	IEA
GO:0040007	growth	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0007165	signal transduction	Biological Process	IEA
GO:0016301	kinase activity	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005102	receptor binding	Molecular Function	IEA
GO:0005886	plasma membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g05630 LOC_Os02g15594 LOC_Os02g55560 LOC_Os02g38780 LOC_Os02g12600 LOC_Os01g70580 LOC_Os01g25440 LOC_Os03g07300 LOC_Os02g39410 LOC_Os01g19130 LOC_Os02g35910 More..
Downstream Genes	LOC_Os07g32380 LOC_Os06g48300 LOC_Os06g33549 LOC_Os04g56450 LOC_Os04g37904 LOC_Os03g18150 LOC_Os06g44210 LOC_Os04g31270 LOC_Os10g39540 LOC_Os05g50970 LOC_Os04g52000 More..

miRNA Regulations
miRNAs	osa-miR531b

Database Links
Gramene	LOC_Os03g12730.1
Rice Genome Annotation	LOC_Os03g12730.1
Ricechip	LOC_Os03g12730.1
KEGG	osa:4332141 dosa:Os03t0228800-01
Entrez-Gene	4332141