RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g12840.1 View Network Show in Genome Browser
Other Names	Os03g0230500
Description	Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 6901924-6907403 Nucleotide Length: 1047
Protein-coding	LOC_Os03g12840

Gene Ontology Classification
GO	Name	Type	Code
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0016301	kinase activity	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0005737	cytoplasm	Cellular Component	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os03g05980 LOC_Os01g19840 LOC_Os02g34460 LOC_Os01g73160 LOC_Os01g48210 LOC_Os01g51020 LOC_Os01g41630 LOC_Os02g57540 LOC_Os03g02540 LOC_Os02g39290 LOC_Os02g13110 More..
Downstream Genes	LOC_Os11g38959 LOC_Os05g28750 LOC_Os03g31090 LOC_Os12g02730 LOC_Os03g46490 LOC_Os04g35090 LOC_Os07g31300 LOC_Os11g13540 LOC_Os03g41438 LOC_Os06g36770 LOC_Os03g41419 More..

Pathways
KEGG Pathways	rn00562 rn01100
Metacyc Pathways	PWY-6362 PWY-6554 PWY-6366 PWY-6365

Reference
PubMed	22038091

Database Links
Gramene	LOC_Os03g12840.1
Rice Genome Annotation	LOC_Os03g12840.1
Ricechip	LOC_Os03g12840.1
KEGG	osa:4332146 dosa:Os03t0230500-01
Entrez-Gene	4332146