RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g12890.2 View Network Show in Genome Browser |
| Other Names | Os03g0231600 |
| Description | aminotransferase domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 6947995-6951344 Nucleotide Length: 1248 |
| Protein-coding | LOC_Os03g12890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g01600 LOC_Os02g30630 LOC_Os01g22520 LOC_Os02g10640 LOC_Os01g57570 LOC_Os03g04240 LOC_Os01g46380 LOC_Os01g06280 LOC_Os03g04250 LOC_Os02g03260 |
| Downstream Genes | LOC_Os05g48450 LOC_Os10g40200 LOC_Os04g52900 LOC_Os04g31960 LOC_Os04g47190 LOC_Os12g08260 LOC_Os06g25439 LOC_Os04g32010 LOC_Os03g50510 LOC_Os04g56646 LOC_Os05g06750 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g12890.2 |
| Rice Genome Annotation | LOC_Os03g12890.2 |
| Ricechip | LOC_Os03g12890.2 |
| KEGG | osa:4332151 dosa:Os03t0231600-01 |
| Entrez-Gene | 4332151 |