RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g13000.2 View Network Show in Genome Browser |
| Other Names | Os03g0232500 |
| Description | GTP-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 7022844-7025908 Nucleotide Length: 957 |
| Protein-coding | LOC_Os03g13000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g27730 LOC_Os02g44000 LOC_Os03g12610 LOC_Os01g65400 LOC_Os01g39010 LOC_Os02g15970 LOC_Os02g37000 LOC_Os01g49290 LOC_Os01g59060 LOC_Os02g07230 |
| Downstream Genes | LOC_Os11g41910 LOC_Os12g09570 LOC_Os11g26030 LOC_Os06g30380 LOC_Os08g31460 LOC_Os03g62750 LOC_Os11g38020 LOC_Os05g35540 LOC_Os03g51840 LOC_Os08g07850 LOC_Os12g19370 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g13000.2 |
| Rice Genome Annotation | LOC_Os03g13000.2 |
| Ricechip | LOC_Os03g13000.2 |
| KEGG | osa:4332158 dosa:Os03t0232500-01 |
| Entrez-Gene | 4332158 |