RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g13040.1 View Network Show in Genome Browser |
| Other Names | Os03g0232900 |
| Description | haemolysin-III, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 7046802-7051333 Nucleotide Length: 1212 |
| Protein-coding | LOC_Os03g13040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0004872 | receptor activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g32660 LOC_Os02g02360 LOC_Os01g42470 LOC_Os01g68310 LOC_Os01g37837 LOC_Os03g10190 LOC_Os02g03620 LOC_Os02g49270 |
| Downstream Genes | LOC_Os07g06440 LOC_Os03g51160 LOC_Os05g28320 LOC_Os04g36810 LOC_Os05g22940 LOC_Os03g22350 LOC_Os03g22890 LOC_Os03g61790 LOC_Os03g20470 LOC_Os05g49230 LOC_Os07g07080 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g13040.1 |
| Rice Genome Annotation | LOC_Os03g13040.1 |
| Ricechip | LOC_Os03g13040.1 |
| KEGG | osa:4332161 dosa:Os03t0232900-01 |
| Entrez-Gene | 4332161 |