RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g13170.1 View Network Show in Genome Browser |
| Other Names | Os03g0234200 |
| Description | ubiquitin fusion protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 7101981-7104766 Nucleotide Length: 390 |
| Protein-coding | LOC_Os03g13170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g47140 LOC_Os02g14059 LOC_Os01g59990 LOC_Os01g10820 LOC_Os02g48660 LOC_Os01g54870 LOC_Os02g30050 LOC_Os03g04750 LOC_Os02g56960 LOC_Os01g61814 LOC_Os03g04590 More.. |
| Downstream Genes | LOC_Os04g50990 LOC_Os09g08430 LOC_Os11g29190 LOC_Os03g46490 LOC_Os05g39960 LOC_Os06g35730 LOC_Os05g11710 LOC_Os07g12250 LOC_Os03g22180 LOC_Os03g37970 LOC_Os06g02510 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g13170.1 |
| Rice Genome Annotation | LOC_Os03g13170.1 |
| Ricechip | LOC_Os03g13170.1 |
| KEGG | osa:4332169 dosa:Os03t0234200-01 |
| Entrez-Gene | 4332169 |