RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g13460.2 View Network Show in Genome Browser |
| Other Names | Os03g0237600 |
| Description | microtubule associated protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 7277308-7284310 Nucleotide Length: 1833 |
| Protein-coding | LOC_Os03g13460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g53520 LOC_Os01g62490 LOC_Os01g06580 LOC_Os01g59150 LOC_Os02g33550 LOC_Os02g31874 LOC_Os02g46320 LOC_Os01g49290 LOC_Os03g08830 LOC_Os03g12300 LOC_Os01g47600 More.. |
| Downstream Genes | LOC_Os05g02820 LOC_Os05g48270 LOC_Os06g08080 LOC_Os06g03760 LOC_Os12g01560 LOC_Os11g01570 LOC_Os04g01300 LOC_Os05g20050 LOC_Os06g38960 LOC_Os06g42800 LOC_Os11g26190 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR531b osa-miR531a osa-miR531c osa-miR1436 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g13460.2 |
| Rice Genome Annotation | LOC_Os03g13460.2 |
| Ricechip | LOC_Os03g13460.2 |
| KEGG | osa:4332190 dosa:Os03t0237600-02 |
| Entrez-Gene | 4332190 |