RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g13560.1 View Network Show in Genome Browser |
| Other Names | Os03g0238800 |
| Description | hydroxyproline-rich glycoprotein family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 7329103-7335053 Nucleotide Length: 1977 |
| Protein-coding | LOC_Os03g13560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g11670 LOC_Os01g59990 LOC_Os01g54870 LOC_Os02g05330 LOC_Os01g61380 LOC_Os02g14059 |
| Downstream Genes | LOC_Os07g10660 LOC_Os05g40820 LOC_Os07g08330 LOC_Os08g33720 LOC_Os09g32976 LOC_Os08g23710 LOC_Os03g31090 LOC_Os07g47710 LOC_Os06g48750 LOC_Os09g32532 LOC_Os09g32520 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g13560.1 |
| Rice Genome Annotation | LOC_Os03g13560.1 |
| Ricechip | LOC_Os03g13560.1 |
| KEGG | osa:4332197 dosa:Os03t0238800-01 |
| Entrez-Gene | 4332197 |