RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g13730.2 View Network Show in Genome Browser |
| Other Names | Os03g0240500 |
| Description | translocase of chloroplast 34, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 7435678-7438082 Nucleotide Length: 696 |
| Protein-coding | LOC_Os03g13730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g10510 LOC_Os01g73780 |
| Downstream Genes | LOC_Os03g16440 LOC_Os09g21460 LOC_Os11g02450 LOC_Os03g55640 LOC_Os06g11620 LOC_Os10g34430 LOC_Os04g43050 LOC_Os09g28000 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g13730.2 |
| Rice Genome Annotation | LOC_Os03g13730.2 |
| Ricechip | LOC_Os03g13730.2 |
| KEGG | osa:4332203 dosa:Os03t0240500-01 |
| Entrez-Gene | 4332203 |