RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g13800.1 View Network Show in Genome Browser |
| Other Names | Os03g0241200 |
| Description | ribosomal protein L7Ae, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 7476238-7478236 Nucleotide Length: 387 |
| Protein-coding | LOC_Os03g13800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59730 LOC_Os01g67134 LOC_Os01g19840 LOC_Os02g57590 LOC_Os01g59990 LOC_Os02g14059 LOC_Os01g16890 LOC_Os02g54700 LOC_Os02g27760 LOC_Os01g62350 LOC_Os01g64090 More.. |
| Downstream Genes | LOC_Os06g48230 LOC_Os05g41110 LOC_Os05g08360 LOC_Os05g28750 LOC_Os08g23730 LOC_Os03g22880 LOC_Os09g24690 LOC_Os04g51630 LOC_Os03g54890 LOC_Os03g22740 LOC_Os12g38000 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1320-3p osa-miR399h |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g13800.1 |
| Rice Genome Annotation | LOC_Os03g13800.1 |
| Ricechip | LOC_Os03g13800.1 |
| KEGG | osa:4332209 dosa:Os03t0241200-00 |
| Entrez-Gene | 4332209 |