RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g13850.1 View Network Show in Genome Browser |
| Other Names | Os03g0242100 |
| Description | cell cycle checkpoint protein RAD17, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 7505851-7513561 Nucleotide Length: 1593 |
| Protein-coding | LOC_Os03g13850 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g53500 LOC_Os01g01689 LOC_Os02g58220 LOC_Os02g39890 LOC_Os03g13800 LOC_Os02g53680 LOC_Os02g30800 LOC_Os02g42230 LOC_Os01g64820 LOC_Os03g08640 LOC_Os03g01100 More.. |
| Downstream Genes | LOC_Os12g07720 LOC_Os03g57870 LOC_Os04g48060 LOC_Os06g50910 LOC_Os11g36390 LOC_Os06g04190 LOC_Os03g22450 LOC_Os03g15810 LOC_Os09g30418 LOC_Os09g30412 LOC_Os08g39140 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g13850.1 |
| Rice Genome Annotation | LOC_Os03g13850.1 |
| Ricechip | LOC_Os03g13850.1 |
| KEGG | osa:4332216 dosa:Os03t0242100-00 |
| Entrez-Gene | 4332216 |