RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g14260.1 View Network Show in Genome Browser |
| Other Names | Os03g0246800 |
| Description | guanine nucleotide exchange family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 7753086-7763728 Nucleotide Length: 5370 |
| Protein-coding | LOC_Os03g14260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59790 LOC_Os01g16030 LOC_Os02g51430 LOC_Os01g54870 LOC_Os01g47660 LOC_Os03g11440 LOC_Os01g50616 LOC_Os02g04020 LOC_Os02g37420 LOC_Os01g59730 LOC_Os01g55040 More.. |
| Downstream Genes | LOC_Os05g41060 LOC_Os03g59740 LOC_Os07g12200 LOC_Os07g12170 LOC_Os05g44310 LOC_Os05g46720 LOC_Os08g15040 LOC_Os07g08330 LOC_Os05g49030 LOC_Os09g17840 LOC_Os09g17830 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR166a-5p osa-miR166c-5p osa-miR166e-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g14260.1 |
| Rice Genome Annotation | LOC_Os03g14260.1 |
| Ricechip | LOC_Os03g14260.1 |
| KEGG | osa:4332241 dosa:Os03t0246800-02 |
| Entrez-Gene | 4332241 |