RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g14890.1 View Network Show in Genome Browser |
| Other Names | Os03g0253800 |
| Description | AGAP008572-PA, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 8111990-8117742 Nucleotide Length: 798 |
| Protein-coding | LOC_Os03g14890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g42990 LOC_Os01g74520 LOC_Os02g10540 |
| Downstream Genes | LOC_Os05g23610 LOC_Os08g36900 LOC_Os08g43540 LOC_Os09g29080 LOC_Os12g35290 LOC_Os05g32140 LOC_Os11g36050 LOC_Os06g24704 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1857-5p osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g14890.1 |
| Rice Genome Annotation | LOC_Os03g14890.1 |
| Ricechip | LOC_Os03g14890.1 |
| KEGG | osa:9272347 dosa:Os03t0253800-01 |
| Entrez-Gene | 9272347 |