RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g14980.2 View Network Show in Genome Browser |
| Other Names | Os03g0254700 |
| Description | lissencephaly type-1-like homology motif, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 8165826-8174905 Nucleotide Length: 3402 |
| Protein-coding | LOC_Os03g14980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g13220 LOC_Os01g68770 LOC_Os01g21940 LOC_Os02g35070 LOC_Os01g56820 LOC_Os02g08190 LOC_Os01g42060 LOC_Os02g18820 LOC_Os03g11200 LOC_Os01g64560 LOC_Os03g13614 More.. |
| Downstream Genes | LOC_Os10g35560 LOC_Os08g16600 LOC_Os04g59460 LOC_Os06g01410 LOC_Os03g48540 LOC_Os08g31970 LOC_Os04g41140 LOC_Os10g24070 LOC_Os10g30620 LOC_Os06g38940 LOC_Os07g31340 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g14980.2 |
| Rice Genome Annotation | LOC_Os03g14980.2 |
| Ricechip | LOC_Os03g14980.2 |
| KEGG | osa:4332285 dosa:Os03t0254700-01 |
| Entrez-Gene | 4332285 |