RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g15120.1 View Network Show in Genome Browser |
| Other Names | Os03g0256400 |
| Description | imidazole glycerol phosphate synthase hisHF, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 8255433-8260811 Nucleotide Length: 1707 |
| Protein-coding | LOC_Os03g15120 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16940 LOC_Os01g43020 LOC_Os02g03740 LOC_Os03g04169 LOC_Os02g16630 LOC_Os01g38970 LOC_Os01g72240 LOC_Os02g08270 LOC_Os01g13190 LOC_Os01g46570 LOC_Os02g47850 More.. |
| Downstream Genes | LOC_Os05g33260 LOC_Os04g52710 LOC_Os03g54230 LOC_Os06g48620 LOC_Os03g50880 LOC_Os08g23730 LOC_Os12g36950 LOC_Os05g28320 LOC_Os09g32810 LOC_Os07g08430 LOC_Os04g39270 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g15120.1 |
| Rice Genome Annotation | LOC_Os03g15120.1 |
| Ricechip | LOC_Os03g15120.1 |
| KEGG | osa:4332296 dosa:Os03t0256400-01 |
| Entrez-Gene | 4332296 |