RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g15540.1 View Network Show in Genome Browser |
| Other Names | Os03g0261900 |
| Description | HEAT repeat family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 8546944-8551685 Nucleotide Length: 981 |
| Protein-coding | LOC_Os03g15540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005635 | nuclear envelope | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g60040 LOC_Os01g60440 LOC_Os02g06592 LOC_Os01g11070 |
| Downstream Genes | LOC_Os04g42370 LOC_Os06g16280 LOC_Os03g42050 LOC_Os11g47320 LOC_Os10g36490 LOC_Os09g38710 LOC_Os03g51140 LOC_Os09g07510 LOC_Os11g47130 LOC_Os06g43760 LOC_Os03g48850 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g15540.1 |
| Rice Genome Annotation | LOC_Os03g15540.1 |
| Ricechip | LOC_Os03g15540.1 |
| KEGG | osa:9269497 dosa:Os03t0261900-02 |
| Entrez-Gene | 9269497 |