RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g15580.1 View Network Show in Genome Browser |
| Other Names | Os03g0262300 |
| Description | AT hook motif family protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 8581500-8596770 Nucleotide Length: 3753 |
| Protein-coding | LOC_Os03g15580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g53500 LOC_Os03g09820 LOC_Os03g10070 LOC_Os01g39630 LOC_Os01g59140 LOC_Os03g08280 LOC_Os02g18550 LOC_Os03g10340 LOC_Os02g01560 LOC_Os01g25610 LOC_Os02g04100 More.. |
| Downstream Genes | LOC_Os12g07720 LOC_Os03g57870 LOC_Os07g04850 LOC_Os09g36440 LOC_Os11g29190 LOC_Os04g41040 LOC_Os07g02210 LOC_Os08g01620 LOC_Os03g18410 LOC_Os05g47480 LOC_Os12g21798 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g15580.1 |
| Rice Genome Annotation | LOC_Os03g15580.1 |
| Ricechip | LOC_Os03g15580.1 |
| KEGG | osa:4332326 dosa:Os03t0262300-01 |
| Entrez-Gene | 4332326 |