RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g15590.1 View Network Show in Genome Browser |
| Other Names | Os03g0262400 |
| Description | eukaryotic translation initiation factor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 8597328-8600511 Nucleotide Length: 684 |
| Protein-coding | LOC_Os03g15590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g73880 LOC_Os03g13100 LOC_Os01g68324 LOC_Os02g39290 LOC_Os01g69130 LOC_Os01g61710 LOC_Os01g07110 LOC_Os02g39890 LOC_Os02g06370 LOC_Os02g58640 |
| Downstream Genes | LOC_Os10g32970 LOC_Os05g30800 LOC_Os05g04330 LOC_Os05g23950 LOC_Os04g14190 LOC_Os04g41550 LOC_Os12g08070 LOC_Os05g38520 LOC_Os04g14110 LOC_Os10g31730 LOC_Os10g31720 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1881 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g15590.1 |
| Rice Genome Annotation | LOC_Os03g15590.1 |
| Ricechip | LOC_Os03g15590.1 |
| KEGG | osa:4332327 dosa:Os03t0262400-01 |
| Entrez-Gene | 4332327 |