RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g15700.1 View Network Show in Genome Browser |
| Other Names | Os03g0263500 |
| Description | splicing factor 3A subunit 2, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 8660124-8663021 Nucleotide Length: 966 |
| Protein-coding | LOC_Os03g15700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g14780 LOC_Os02g58090 LOC_Os02g05310 LOC_Os02g04480 LOC_Os03g13760 LOC_Os02g01250 LOC_Os02g05410 LOC_Os02g27790 LOC_Os02g16640 LOC_Os02g01740 LOC_Os02g13990 More.. |
| Downstream Genes | LOC_Os03g50850 LOC_Os03g61640 LOC_Os08g45040 LOC_Os12g31840 LOC_Os05g24970 LOC_Os05g07050 LOC_Os08g06344 LOC_Os09g25430 LOC_Os04g41910 LOC_Os05g46560 LOC_Os06g14190 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g15700.1 |
| Rice Genome Annotation | LOC_Os03g15700.1 |
| Ricechip | LOC_Os03g15700.1 |
| KEGG | osa:4332334 dosa:Os03t0263500-01 |
| Entrez-Gene | 4332334 |