RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g15870.1 View Network Show in Genome Browser |
| Other Names | Os03g0265400 |
| Description | ribosomal protein L4, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 8753551-8756023 Nucleotide Length: 972 |
| Protein-coding | LOC_Os03g15870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g10060 LOC_Os02g04460 LOC_Os03g03360 LOC_Os01g14830 LOC_Os02g51790 LOC_Os01g59060 LOC_Os03g12020 LOC_Os03g14530 LOC_Os01g42980 LOC_Os03g04590 LOC_Os02g56960 More.. |
| Downstream Genes | LOC_Os03g34040 LOC_Os06g46930 LOC_Os07g23244 LOC_Os03g61260 LOC_Os12g07010 LOC_Os11g06750 LOC_Os12g33240 LOC_Os06g34780 LOC_Os03g58430 LOC_Os07g08660 LOC_Os03g54040 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g15870.1 |
| Rice Genome Annotation | LOC_Os03g15870.1 |
| Ricechip | LOC_Os03g15870.1 |
| KEGG | osa:4332348 dosa:Os03t0265400-01 |
| Entrez-Gene | 4332348 |