RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g16000.1 View Network Show in Genome Browser |
| Other Names | Os03g0266700 |
| Description | src homology-3 domain protein 3, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 8819144-8824333 Nucleotide Length: 1185 |
| Protein-coding | LOC_Os03g16000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g15900 LOC_Os02g32740 LOC_Os01g01160 LOC_Os02g38980 LOC_Os03g06460 LOC_Os02g24080 LOC_Os03g11380 LOC_Os01g57220 LOC_Os01g27940 LOC_Os02g32730 LOC_Os02g20850 More.. |
| Downstream Genes | LOC_Os10g28660 LOC_Os07g07950 LOC_Os03g46090 LOC_Os05g51650 LOC_Os03g57950 LOC_Os05g29870 LOC_Os03g22450 LOC_Os06g51250 LOC_Os07g37740 LOC_Os05g42330 LOC_Os12g01449 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g16000.1 |
| Rice Genome Annotation | LOC_Os03g16000.1 |
| Ricechip | LOC_Os03g16000.1 |
| KEGG | osa:4332358 dosa:Os03t0266700-01 |
| Entrez-Gene | 4332358 |