RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g16050.1 View Network Show in Genome Browser |
| Other Names | Os03g0267300 |
| Description | fructose-1,6-bisphosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 8841268-8843069 Nucleotide Length: 1221 |
| Protein-coding | LOC_Os03g16050 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g10060 LOC_Os02g09150 LOC_Os03g03720 LOC_Os02g01150 LOC_Os02g51470 LOC_Os02g01340 LOC_Os02g50980 LOC_Os03g14250 LOC_Os02g06640 LOC_Os01g45274 LOC_Os02g48720 More.. |
| Downstream Genes | LOC_Os04g53230 LOC_Os12g03070 LOC_Os07g37250 LOC_Os07g11110 LOC_Os07g37030 LOC_Os12g23180 LOC_Os06g04150 LOC_Os03g36750 LOC_Os07g08200 LOC_Os10g37180 LOC_Os04g41340 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00680 rn00710 rn01100 rn01120 rn01110 rn00051 rn00010 rn00030 |
| Metacyc Pathways | P185-PWY GLUCONEO-PWY CALVIN-PWY GLYCOLYSIS PWY-5484 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g16050.1 |
| Rice Genome Annotation | LOC_Os03g16050.1 |
| Ricechip | LOC_Os03g16050.1 |
| KEGG | osa:4332364 dosa:Os03t0267300-01 |
| Entrez-Gene | 4332364 |