RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g16170.1 View Network Show in Genome Browser |
| Other Names | Os03g0268600 |
| Description | protein phosphatase 2C, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 8921370-8923437 Nucleotide Length: 1215 |
| Protein-coding | LOC_Os03g16170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g12580 LOC_Os02g52780 LOC_Os01g04550 LOC_Os01g04570 LOC_Os01g56330 LOC_Os01g20880 LOC_Os01g04490 LOC_Os01g02580 LOC_Os01g02830 LOC_Os01g02800 LOC_Os01g02680 More.. |
| Downstream Genes | LOC_Os05g35410 LOC_Os05g14260 LOC_Os12g29400 LOC_Os12g14699 LOC_Os06g42800 LOC_Os07g43570 LOC_Os11g39370 LOC_Os11g17380 LOC_Os12g24420 LOC_Os07g47950 LOC_Os10g02250 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g16170.1 |
| Rice Genome Annotation | LOC_Os03g16170.1 |
| Ricechip | LOC_Os03g16170.1 |
| KEGG | osa:4332374 dosa:Os03t0268600-01 |
| Entrez-Gene | 4332374 |