RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g16610.1 View Network Show in Genome Browser |
| Other Names | Os03g0273200 |
| Description | laccase precursor protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 9167558-9170334 Nucleotide Length: 1737 |
| Protein-coding | LOC_Os03g16610 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54620 LOC_Os01g02010 LOC_Os02g07630 |
| Downstream Genes | LOC_Os06g11490 LOC_Os05g48270 LOC_Os04g33450 LOC_Os05g07060 LOC_Os04g48930 LOC_Os04g36720 LOC_Os10g32980 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR397a osa-miR397b |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g16610.1 |
| Rice Genome Annotation | LOC_Os03g16610.1 |
| Ricechip | LOC_Os03g16610.1 |
| KEGG | osa:4332400 dosa:Os03t0273200-01 |
| Entrez-Gene | 4332400 |