RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g16740.1 View Network Show in Genome Browser |
| Other Names | Os03g0274800 |
| Description | protein kinase APK1A, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 9269491-9273582 Nucleotide Length: 1125 |
| Protein-coding | LOC_Os03g16740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os02g15594 LOC_Os02g55560 LOC_Os02g39290 LOC_Os01g12720 LOC_Os02g38780 LOC_Os02g08364 LOC_Os03g07300 LOC_Os03g12570 LOC_Os02g12600 LOC_Os01g54700 More.. |
| Downstream Genes | LOC_Os07g32380 LOC_Os06g48300 LOC_Os06g33549 LOC_Os04g37904 LOC_Os05g12680 LOC_Os05g23950 LOC_Os04g14190 LOC_Os04g52000 LOC_Os12g08070 LOC_Os06g44210 LOC_Os04g56450 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g16740.1 |
| Rice Genome Annotation | LOC_Os03g16740.1 |
| Ricechip | LOC_Os03g16740.1 |
| KEGG | osa:4332405 dosa:Os03t0274800-01 |
| Entrez-Gene | 4332405 |