RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g16980.1 View Network Show in Genome Browser
Other Names	Os03g0278000
Description	NAD dependent epimerase/dehydratase family domain containing protein, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 9436483-9440656 Nucleotide Length: 1053
Protein-coding	LOC_Os03g16980

Gene Ontology Classification
GO	Name	Type	Code
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005886	plasma membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g40030 LOC_Os01g59150 LOC_Os02g57990 LOC_Os02g57180 LOC_Os03g07140 LOC_Os01g48440 LOC_Os02g20850 LOC_Os01g42850 LOC_Os02g58730 LOC_Os01g52710 LOC_Os02g02840 More..
Downstream Genes	LOC_Os04g01300 LOC_Os10g13810 LOC_Os04g01280 LOC_Os12g37870 LOC_Os06g49320 LOC_Os05g20050 LOC_Os06g25439 LOC_Os05g03174 LOC_Os05g48600 LOC_Os03g55070 LOC_Os06g12790 More..

miRNA Regulations
miRNAs	osa-miR164e

Pathways
KEGG Pathways	rn00051 rn00520 rn01100 rn00500 rn00052 rn01110
Metacyc Pathways	PWY-2582 DTDPRHAMSYN-PWY PWY-66 GDPRHAMSYN-PWY PWY-4821 UDPNACETYLGALSYN-PWY PWY-3821 P61-PWY GALACTMETAB-PWY

Database Links
Gramene	LOC_Os03g16980.1
Rice Genome Annotation	LOC_Os03g16980.1
Ricechip	LOC_Os03g16980.1
KEGG	osa:4332424 dosa:Os03t0278000-01
Entrez-Gene	4332424