RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g17120.2 View Network Show in Genome Browser |
| Other Names | Os03g0279400 |
| Description | arginine biosynthesis bifunctional protein argJ 1, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 9506731-9510937 Nucleotide Length: 1098 |
| Protein-coding | LOC_Os03g17120 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g21820 LOC_Os02g44000 LOC_Os02g48660 LOC_Os03g04169 LOC_Os02g10070 LOC_Os03g08280 LOC_Os01g55890 LOC_Os03g04410 LOC_Os02g51370 LOC_Os02g47590 LOC_Os01g70990 More.. |
| Downstream Genes | LOC_Os09g20090 LOC_Os06g37080 LOC_Os10g35170 LOC_Os03g42110 LOC_Os11g08980 LOC_Os09g32952 LOC_Os04g46460 LOC_Os06g37150 LOC_Os06g02160 LOC_Os05g27940 LOC_Os03g18570 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR167e-3p osa-miR167i-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g17120.2 |
| Rice Genome Annotation | LOC_Os03g17120.2 |
| Ricechip | LOC_Os03g17120.2 |
| KEGG | osa:4332434 dosa:Os03t0279400-02 |
| Entrez-Gene | 4332434 |