RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g17140.1 View Network Show in Genome Browser |
| Other Names | Os03g0279600 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 9519883-9521111 Nucleotide Length: 744 |
| Protein-coding | LOC_Os03g17140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g02400 LOC_Os01g06560 LOC_Os01g68790 LOC_Os01g59990 LOC_Os01g48300 LOC_Os01g36090 LOC_Os01g08700 LOC_Os02g49830 LOC_Os02g49820 |
| Downstream Genes | LOC_Os10g30100 LOC_Os07g43810 LOC_Os03g27260 LOC_Os03g21530 LOC_Os09g37860 LOC_Os09g27030 LOC_Os07g07150 LOC_Os04g36890 LOC_Os07g43560 LOC_Os03g22050 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g17140.1 |
| Rice Genome Annotation | LOC_Os03g17140.1 |
| Ricechip | LOC_Os03g17140.1 |
| KEGG | osa:4332435 dosa:Os03t0279600-01 |
| Entrez-Gene | 4332435 |