RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g17174.1 View Network Show in Genome Browser |
| Other Names | Os03g0279950 |
| Description | PsbP, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 9555524-9557435 Nucleotide Length: 699 |
| Protein-coding | LOC_Os03g17174 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g43070 LOC_Os01g66000 LOC_Os02g50010 |
| Downstream Genes | LOC_Os06g04150 LOC_Os07g33660 LOC_Os03g48040 LOC_Os03g36750 LOC_Os07g30670 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g17174.1 |
| Rice Genome Annotation | LOC_Os03g17174.1 |
| Ricechip | LOC_Os03g17174.1 |
| KEGG | osa:9267250 dosa:Os03t0279950-01 |
| Entrez-Gene | 9267250 |