RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g17310.1 View Network Show in Genome Browser
Other Names	Os03g0281600,Os03g0281466
Description	calcium-transporting ATPase, endoplasmic reticulum-type, putative, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 9632645-9642093 Nucleotide Length: 3189
Protein-coding	LOC_Os03g17310

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009056	catabolic process	Biological Process	IEA
GO:0009056	catabolic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0005215	transporter activity	Molecular Function	IEA
GO:0005215	transporter activity	Molecular Function	IEA
GO:0005783	endoplasmic reticulum	Cellular Component	IEA
GO:0005783	endoplasmic reticulum	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g55040 LOC_Os02g08010 LOC_Os03g06200 LOC_Os03g05980 LOC_Os03g03610 LOC_Os02g55880 LOC_Os02g53420 LOC_Os03g10450 LOC_Os02g14000 LOC_Os03g01216 LOC_Os03g10640 More..
Downstream Genes	LOC_Os04g51610 LOC_Os08g44770 LOC_Os06g08380 LOC_Os05g33390 LOC_Os05g25850 LOC_Os03g27960 LOC_Os11g38959 LOC_Os06g51270 LOC_Os10g28240 LOC_Os04g55940 LOC_Os09g19734 More..

Database Links
Gramene	LOC_Os03g17310.1
Rice Genome Annotation	LOC_Os03g17310.1
Ricechip	LOC_Os03g17310.1
KEGG	osa:4332447 osa:9272365 dosa:Os03t0281600-01 dosa:Os03t0281466-01
Entrez-Gene	4332447 4348523