RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g17450.1 View Network Show in Genome Browser |
| Other Names | Os03g0282900 |
| Description | nucleotide binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 9703689-9707179 Nucleotide Length: 717 |
| Protein-coding | LOC_Os03g17450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g48770 LOC_Os01g52490 LOC_Os02g45820 LOC_Os02g55420 LOC_Os01g52390 |
| Downstream Genes | LOC_Os10g34180 LOC_Os08g21840 LOC_Os03g61560 LOC_Os12g29660 LOC_Os05g37330 LOC_Os05g51180 LOC_Os11g05562 LOC_Os04g36890 LOC_Os03g63400 LOC_Os08g10608 LOC_Os03g63550 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g17450.1 |
| Rice Genome Annotation | LOC_Os03g17450.1 |
| Ricechip | LOC_Os03g17450.1 |
| KEGG | osa:4332453 dosa:Os03t0282900-01 |
| Entrez-Gene | 4332453 |