RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g17470.1 View Network Show in Genome Browser |
| Other Names | Os03g0283100 |
| Description | IN2-1 protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 9712370-9714748 Nucleotide Length: 738 |
| Protein-coding | LOC_Os03g17470 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g49710 LOC_Os03g04260 LOC_Os01g27260 LOC_Os01g70960 LOC_Os02g32120 LOC_Os02g02390 |
| Downstream Genes | LOC_Os10g38710 LOC_Os10g38580 LOC_Os10g38360 LOC_Os10g38340 LOC_Os04g17050 LOC_Os09g29200 LOC_Os09g20220 LOC_Os04g35560 LOC_Os05g23620 LOC_Os04g32660 LOC_Os12g10604 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2104 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00480 |
| Metacyc Pathways | PWY-4061 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g17470.1 |
| Rice Genome Annotation | LOC_Os03g17470.1 |
| Ricechip | LOC_Os03g17470.1 |
| KEGG | osa:4332455 dosa:Os03t0283100-01 |
| Entrez-Gene | 4332455 |